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Immobilized fluorogenic substrates for enzymes; and processes for their preparation    
United States Patent4897444   
Link to this pagehttp://www.wikipatents.com/4897444.html
Inventor(s)Brynes; Paul J. (Libertyville, IL); Andrade-Gordon; Patricia (Port Jefferson, NY)
AbstractAn immobilized fluorogenic substrate useful in processes for identifying and quantifying, intra- and extra-cellularly, and mammalian body fluids, as well as animal cell abstracts is disclosed. The immobilized fluorogenic substrate has the structure R.sub.1 --NH--R.sub.4 --R.sub.2 --R.sub.3 wherein R.sub.1 represents an enzyme-specific oligopeptide; R.sub.2 represents a spacer group which is methylenecarbonyloxy, a methylenecarboxamido, or a methylanesulfonamido group attached to a polymethylene chain which itself has a functional group suitable for coupling with a polymer; R.sub.3 represents a biologically inert polymer; and R.sub.4 represents a fluorogenic moiety.



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Drawing from US Patent 4897444
Immobilized fluorogenic substrates for enzymes; and processes for their

     preparation - US Patent 4897444 Drawing
Immobilized fluorogenic substrates for enzymes; and processes for their preparation
Inventor     Brynes; Paul J. (Libertyville, IL); Andrade-Gordon; Patricia (Port Jefferson, NY)
Owner/Assignee     The Research Foundation of the State University of New York (Albany, NY)
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Publication Date     January 30, 1990
Application Number     06/740,706
PAIR File History     Application Data   Transaction History
Image File Wrapper   Patent Term   Fees
Litigation
Filing Date     June 3, 1985
US Classification     525/54.1 435/23 435/24 530/300 530/330 530/331
Int'l Classification     C08L 089/00
Examiner     Rosen; Sam
Assistant Examiner    
Attorney/Law Firm     Morgan & Finnegan
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Parent Case     This application is a continuation-in-part of U.S. Ser. No. 739,746 filed May. 31, 1985, now abandoned.
Priority Data    
USPTO Field of Search     530/380 530/330 530/331 525/54.1 435/23 435/24
Patent Tags     immobilized fluorogenic substrates enzymes; their preparation
   
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What is claimed is:

1. An immobilized fluorogenic substrate for identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell-specific enzymes in human and mammalian body fluids as well as in animal extracts, which has the structure:

R.sub.1 -NH-R.sub.4 -R.sub.2 -R.sub.3

wherein

R.sub.1 represents an oligopeptide which has an amino acid sequence that is enzyme-specific in terms of cleavage of the amino acid sequence at the peptide linkage proximal to a fluorogenic moiety, the oligopeptide comprising naturally occurring amine acids associated with mammalian and bacterial systems, R.sub.1 being joined to NH via a carbonyl group in R.sub.1 ;

R.sub.2 represents a spacer group which comprises a group having the structural formula (CH.sub.2 X.sub.1 X.sub.2a (CH.sub.2).sub.y X.sub.3) wherein X.sub.1 is CO or SO.sub.2 ; X.sub.2 is NH; a is zero or one, provided that when a is zero, X.sub.1 is CO; X.sub.3 is a member selected from the group consisting of NH, NHCO, CONH, OCO, COO or Si(0--).sub.3 ; and y is an integer from zero to 15;

R.sub.3 represent a glass or polymer having a complementary group which forms an ester or amide linkage with the .omega.sulfonic acid or .omega.-carboxylic acid function of the spacer group or an ether linkage with the .omega.-carbon atom and hydroxyl group in the polymer; and

NH-R.sub.4 represents a fluorogenic moiety having a second functional group to which is attached the spacer group, said fluorogenic moiety selected from the group consisting of aminoquinolines and their alkyl and alkoxyl derivatives; alkyl, alkoxyl and carboxyl derivatives of aminonaphthalenes; alkyl, akoxyl and carboxyl derivatives of aminocoumarines; alkyl, alkoxyl and carboxyl derivatives of acridines; and alkyl, alkoxyl, amino, nitro and carboxyl derivatives of benzofurazans.

2. The substrate of claim 1 wherein R.sub.3 is selected from the group consisting of polyacrylamide, poly(4-aminostyrene) and glass.

3. The substrate of claim 1 wherein R.sub.3 comprises a copolymer of an N-allyl amide with a polymerizable monomer selected from the group consisting of styrene, butadiene, vinyl acetate, acrylic esters, acrylic amides and mixtures thereof, the N-allyl amide being the non-alkylating terminal group of the spacer group.

4. The substrate of claim 1 wherein R.sub.2 is selected from the group consisting of CH.sub.2 CONH(CH.sub.2).sub.5 CO; CH.sub.2 CONHCH.sub.2 CH.sub.2 NH; and CH.sub.2 CO.

5. The substrate of claim 1 wherein R.sub.1 is selected from the group consisting of

X-valyl-prolyl-arginyl-Y;

X-(D)-phenylalnyl-picolyl-arginyl-Y;

X-phenylalanyl-valyl-arginyl-Y;

X-glycyl-prolyl-arginyl-Y;

X-valyl-leucyl-lysyl-Y; X-(D)-valyl-leucyl-lysyl-Y;

X-glytamyl-lysyl-lysyl-Y; X-glycyl-proplyl-lysyl-Y;

X-valyl-glycyl-arginyl-Y; X-glutamyl-glycyl-arginyl-Y;

X-propyl-phenylalnyl-arginyl-Y; X-(D)-prolyl

phenylalanyl-arginyl-Y; X-(D)-valyl-leucyl-arginyl-Y;

X-isoleucyl-glutamyl-glycl-arginyl-Y;

X-alanyl-propyl-alanyl-Y;

X-alanyl-alanyl-prolyl-valyl-Y; and

X-alanyl-alanyl-propyl-methionyl-Y; wherein

X is a N-terminal blocking agent or H and Y is a fluorescent amine.

6. The substrate of claim 1 wherein the fluorogenic moiety is selected from the group consisting of

3-amino-quinoline,

2-(N,N-dimethylamino)methyl-6-aminonaphthalene and

4-(N,N-dimethylamino)methyl-6-aminocoumarin.

7. An immobilized fluorogenic substrate for identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell-specific enxymes in human and mammalian body fluids as well as in animal cell extracts, which has the structure: ##STR16## wherein R.sub.1 represents an oligopeptide which has an amino acid sequence that is enzyme-specific in terms of cleavage of the amino acid sequence at the peptide linkage proximal to the quinoline ring;

R.sub.2 represents a spacer group which comprises a group having the structural formula (CH.sub.2 X.sub.1 X.sub.2a (CH.sub.2).sub.y X.sub.3) wherein X.sub.1 is CO or SO.sub.2 ; X.sub.2 is NH; a is zero or one, provided that when a is zero, X.sub.1 is CO; X.sub.3 a member selected from the group consisting of NH, NHCO, CONH, OCO, COO or Si(O--).sub.3 ; and y is an integer from zero to 15; and

R.sub.3 represents a polymer having a complementary group which forms an ester or amide linkage with the .omega.-sulfonic acid or .omega.-carboxylic acid function of the spacer group.

8. A process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell-specific enzymers in human and mammalian body fluids as well as in animal cell extracts which comprises:

(a) coupling an enzyme-specific oligopeptide to the primary amino group of a fluorescent aminoquinoline via an amide linkage;

(b) guaternizing the ring nitrogen of the quinoline moiety with an alkylating spacer group selected from haloacetylamino, halo-acetoxy- or halomethylsulfonylamino-polyethylene compounds having an .omega.-amino (protected), an .omega.-hydroxyl or .omega.-carboxylic acid group;

(c) coupling the .omega.-functional group of a spacer moiety with the complementary group of the polymer material to form an ester or an amide linkage, which intrinsically immobilizes the peptidyl quinoline assembly.

9. A process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell specific enzymes which comprises:

(a) coupling an enzyme-specific oligopeptide to the primary amino group of a fluorescent aminoquinoline via an amide linkage;

(b) quaternized the ring nitrogen of the quinoline moiety with an allyl group to produce an allylic monomer; and

(c) copolymerizing the allylic monomer with a second polymerizable monomer in the presence of a radial-generating catalyst, to immobilize the enzyme cleavable substrate.

10. The process of claim 9 wherein the second monomer is selected from the group consisting of hydroxyethyl methacrylate, vinyl chloride, styrene and butadiene.

11. A process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell specific enzymes which comprises:

(a) coupling an enzyme-specific oligopeptide to the primary amino group of a fluorescent aminoquinoline via an amide linkage;

(b) quaternizing the ring nitrogen of the quinoline moiety with an alkylating spacer group selected from the group consisting of haloacetylamino, haloacetoxy- or halomethylsulfonylamino-polymethylene compounds having an .omega.-amino (protected), an .omega.-hydroxyl or .omega.-carboxylic acid group;

(c) reacting the product of step (b) with an allyl amine using a mixed anhydride coupling technique to produce an allylic monomer; and

(d) copolymerizing the allylic monomer with a second polymerizable monomer in the presence of a radical-generating catalyst, to immobilize the enzyme cleavable substrate.
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BACKGROUND OF THE INVENTION

1. Field of The Invention

This invention relates to new immobilized substrates and processes for their preparation and use in identifying and quantifying production and/or secretion of an enzyme specific to a cell type.

2. Description of Prior Art

A considerable body of research has centered on improving the early diagnosis of invasive and degenerative diseases such as cancer, arthritis and pulmonary emphysema. Standard methods for determining identities of pathogenic bacteria associated with infections are lengthy and often entail a wait of up to two days after taking cultures. These diseases involve synthesis and secretion by tissues of proteolytic enzymes (proteinases) that are capable of catalyzing the breakdown of proteinaceous materials. In cancer primarily connective tissues (collagen, elastin, etc.) which are hydrolyzed, and thus degraded, during the processes of tumor invasion and metastasis, or during the degradation of pulmonary alveolar membranes. In arthritis, articular cartilage surfaces are eroded enzymatically by the action of a variety of proteases collectively known as collagenases. A broad range of bacterial cells secrete other proteinases that are used to destroy antibodies produced and employed by the body to limit the invasion of microbes.

Uncontrolled destruction of intra- or extracellular proteins by proteinases is associated with many pathological conditions such as the breakdown of articular cartilage by elastase during rheumatoid arthritis, the destruction of pulmonary elastin by elastase during emphysema, and the activation of plasminogen during the invasion of healthy tissues by tumor cells. Proteolytic enzymes also play a role in rotavirus infectivity and are important for rotavirus propagation.

Proteolytic enzymes are involved in loss of growth regulation, invasiveness, metastasis, and formation of malignant tumors. Although tumor cells produce a wide variety of proteinases, the occurence of high levels of plaminogen activator (PA) is uniquely associated with malignancy. Elastase, a serine proteinase has been isolated and characterized from the human granulocyte (PMN). This enzyme is responsible for the release of proteoglycan matrix from intact articular cartilage and can degrade isolated aggregates or subunits of proteoglycan in solution. Elastase also stimulates cellular migration to the site of inflammation, can cleave intermolecular cross links of collagen, and can also cleave the helical portion of collagen III and IV. The latter action of elastase could be of the utmost importance in tissue damage. It is of great importance then to characterize the proteinase active in the acute response to inflammatory disease. Although similar proteinase activity is found in macrophages and in neutrophils, the major natural proteinase secreted by activated or inflammatory macrophages is plaminogen activator while elastase is most probably the key enzyme in neutrophil mediated proteolysis.

Simple synthetic substrates in which only one bond is susceptible to enzymatic hydrolysis often are used to assay serine proteinases. Most often, esters of L amino acids blocked at the N terminal are used. Ester substrates have the advantage over the corresponding amides in that Km values are lower and catalytic rate constants are higher. However, esters present difficulty in measuring the products of hydrolysis, i.e., the alcohol and the free amino acid. They also are not as well-selectively distinguished in the process of enzyme recognition. For example, Visser et al., 268 Biochim. Biophys. Acta 257 (1972) introduced the use of Boc-Alanyl-p-nitrophenyl ester as a substrate for elastase. However, it is also susceptible to hydrolysis by trypsin and chymotrypsin, is poorly water soluble and undergoes considerably spontaneous hydrolysis at pH 8.0. The acetyl-(alanine).sub.3 -methyl ester substrate that was proposed by Gertler et al., 48 Canad. J. Biochem. 384 (1970) overcomes most of these disadvantages, but its enzymatic hydrolysis must be monitored by time consuming potentiometric methods. The general applicability of esterolytic assays has been limited.

Studies of the action of a proteinase on small natural peptides of known sequences also have been useful in obtaining a broad characterization of the enzyme in question. The oligopeptides obtained, after proteolytic digestion under controlled conditions, are separated and identified.

For measurement of general proteolytic activity, the method of Kunitz, 22 J. Gen. Physiol. 429-446 (1939) is usually applied. This method uses casein as the substrate and a spectrophotometric method which depends upon differences in absorption between the products of hydrolysis and the substrate. The rate of change in absorption at a selected wavelength is proportional to the rate of hydrolysis.

Erlanger et al., 3 Biochemistry 346 (1961) describe the use of the p-nitroanilide of N benzylarginine (BAPNA) as a substrate for trypsin like proteinases. Colorimetric assays employing this substrate have two major or advantages over previous assays. First, the bond that is cleaved is an amide bond. Selectivity of proteolytic enzymes is much better for amide bonds than ester bonds. Second, the p-nitroanilide derivative is a chromogenic substrate. When it is cleaved by the enzyme, p-nitroaniline is released, which has a strong ultraviolet absorption at a different wavelength from that of the substrate. p-Nitroaniline is an aromatic amine with an extinction coefficient of 8,800 at 410 nm (Erlanger et al., supra). This compound, however, cannot be detected below 10.sup.-7 M unless it is converted by diazo coupling into a derivative having a stronger chromphore (Bieth et al., 53(2) Biochem. Biophys. Res. Comm. 383390 (1973)).

Fluorogenic substrates for proteinases have recently drawn considerable attention because they are capable of lowering the limit of detection obtainable from peptidyl p-nitroanilide substrates by as much as two orders of magnitude. The fluorogenic portion is generally an acylated aromatic amine. Upon hydrolysis, the spectroscopic properties of the leaving groups usually shift to longer wavelengths of absorption and/or emission, that are characteristic for the particular fluorophore.

Zimmerman et al., 70 Anal. Biochem. 258-262 (1976) describe the use of the fluorogenic substrate, 7 -glutaryl phenylalanylamido-4-methylcoumarin as a stable amide substrate for chymotrypsin. The sensitivity of this substrate is due to the fact that the leaving group, 7-amino-4 -methylcoumarin (AMC), is highly fluorescent. The amides are stable in solution and are in addition more closely related to the natural substrates. In a later study (Zimmerman et al., 78 Anal. Biochem, 47-51 (1977)), the preparation and use of fluorogenic amide using aminocoumarin as the leaving group was described for trypsin and elastase.

Castillo et al., 99 Anal. Biochem. 53-64 (1979) reported different substrates in which the leaving group was varied. The sequence used for the peptide was MeOSuc-Ala-Ala-Pro-Val-X, which had been shown to be highly reactive and relatively specific toward human leukocyte elastase (HLE). The X in the sequence represented 4-nitroanilide ( NA), thiobenzyl ester (-SBzl), 4-methyl-7-aminocoumarylamide (-AMC), or 1-methoxy-3-naphthylamide (-NNapOMe). The thiol benzyl ester substrate was shown to be the best of the series. Advantages of this substrate are its high kcatKm values and ease of synthesis. However, there is often interference from high concentrations of thiols present in samples such as cellular extracts or culture media. The peptidyl-AMC substrates are as sensitive as the thiol benzyl ester. They are, however, more difficult to synthesize and have lower kcat/Km values. The enzymatic cleavage does, in this case, involve a peptide linkage. However, for a rate assay, it had a lower sensitivity than either the thiobenzyl ester or peptidyl-AMC.

The following patents and reports also describe the use and application of solution chromogenic substrates: U.S. Pat. Nos. 3,884,896; 3,886,136; 4,016,042; 4,070,245 and 4,188,264; Plapinger et al 30 J Org Chem. 1781-1785 (1965) and Nachlas et al., 108 Arch. Biochem. Biophys., 266-274 (1964).

An assay for proteinases based on the fluorescent labeling of insoluble proteins (fibrin) or of soluble casein was described by Wiesner et al., 121 Anal. Biochem. 290-294 (1082). The fluorogenic reagent 2-methoxy-2,4-diphenyl-3(2H)-furanone (MDPF) was used to label the proteins. Fluorescence of the liberated peptide fluorophore conjugates resulting from enzymatic hydrolysis was measured in the supernatant after separation of the unreactive casein-fluorophore by acid precipitation. However, the enzymatic hydrolysis cannot be followed continuously during the time of incubation since interruption of the reaction is necessary for removal of the supernatant products.

Dipeptide derivatives of rhodamine were reported by Leytus et al., 215 Biochem. J. 253-260 (1983) as having a high degree of sensitivity and selectivity.

Synthetic chromogenic or fluorogenic substrates composed of peptidyl amides of aromatic amines have been widely used to detect and quantify proteinases and to define their amino acid specificities (Knight, Proteases in Mammalian Cells and Tissues, North Holland Pub. Co Amsterdam 1977)). Because of the sensitivity of fluorimetry, fluorogenic substrates are particularly suitable as probes of enzyme structure and mechanism. A number of problems, however, are generally encountered that limit the use of these agents.

First, the fluorescence spectra of the substrate and product often overlap to a significant degree, and it becomes necessary to use wavelengths longer than the excitation maximum to excite the product in order to avoid high levels of background emission from the excess unhydrolyzed substrate. This compromise decreases the fluorescence intensity used to estimate product, thereby lowering the sensitivity of the assay. For example, fluorogenic leaving groups such as .beta.-naphthylamine and 7-amino-4-methylcoumarin can be detected at nanomolar concentrations, yet this limit is not often achieved experimentally under assay conditions. If the spectrofluorimeter is adjusted to monitor the appearance of the product at its fluorescence maximum, high levels of background emission are produced by the large excess of substrate and it becomes exceedingly difficult to measure accurately the amount of amine liberated early in the course of substrate hydrolysis. Consequently, it is rare that both excitation and emission maxima can be selected for fluorescence studies of this type. Instead, a compromise must be reached between decreased background fluorescence at the expense of operating in the lower fluorescence spectral region of the product.

Second, the aromatic amines are usually hydrophobic and thus require organic cosolvents (e.g., dimethylformamide or dimethyl sulfoxide) to solubilize them. The presence of these solvents can produce unpredictable inhibitory or stimulatory effects on the enzyme. In addition, such solvents are inappropriate for the in situ assay of proteinases in cell culture.

Third, the currently available chromogenic or fluorogenic groups are not readily amenable to derivatization. A leaving group of the substrate should be readily derivatized into series of congeners which allow studies of the steric and electronic requirements of the active site of the enzyme. Moreover, derivatization of this sort permits the possibility of immobilizing the fluorogenic moiety on solid supports via covalent bond formation.

Fourth, these compounds are not conveniently used for the assay of single cells. Several laboratories have explored the application of chromogenic peptides as histochemical probes for revealing the presence of peptidase activity in cells (Dolbeare et al., 27(11) J. Histochem. Cytochem 1493-1495 (1979); and Sannes et al., 27 J. Histochem. Cytochem 1496-1497 (1979)); and tissue sections (Blasini et al., 13 Thrombosis Rev. 585-590 (1978); and Grabske et al., (11) J. Histochem. Cytochem. 1505-1508 (1979)). Although these substrates are selective reagents for the quantitation of various proteinases, a major shortcoming is that they are only practical for the assay of proteinases released into the extracellular medium by a population of cells. Another disadvantage of these cytochemical methods is that the low concentration of chromopore that is liberated by cellular proteinases is difficult to detect, and hence, it must often be visualized by conversion, using an azocoupling reaction, into derivatives having larger extinction coefficients. Unfortunately, the vigorous conditions needed to affect this transformation preclude its use with cells and tissues where one wishes to maintain viability.

Recently, a fluorescent proteinase transition state analog-inhibitor, dansyl-L-arginal (DansArgH) was introduced as a selective probe for cysteine and serine type proteinases in a fibrosarcoma tumor cell line (Kozlowski et al., 81 Proc. Nat'l. Acad. Sci. 1135-1139 (1984)). However, the conditions used to quantify and to visualize enzyme activity also prevented the maintenance of cell viability.

Fifth, a drawback of low molecular weight substrates is that they diffuse from the site of reaction, even if entrapped within an agarose or gelatin matrix. This limits their application as probes of proteinase activity in single-cells. As a result, only very brief exposure periods can be employed if enzyme activity is to be localized at an individual cell or discrete tissue region. These restrictions diminish the sensitivity of such methods and confine application to cells which secrete relatively large amounts of proteinase. Similar limitations also are encountered when radiolabeled substrates dried onto the surface of microtiter wells are used as an assay for proteolytic activity (Varani et al., 107 Anal. Biochem. 377-384 (1980)). Besides the usual disadvantage of handling radioactive materials, one cannot localize the regions of proteolytic activity since the radioactive product of the reaction is released into the supernatant fluid.

Sixth, a disadvantage of currently used proteinase detection methods concerns quantitative. Individual cells that secrete specific proteinases have been identified by techniques that involve the formation of a pericellular lysis zone in an opalescent agar matrix containing a natural substrate such as fibrin or casein (Jones et al., 5 Cell. 323-329, (1975)). Although this type of assay is sensitive, it is not quantitative because the relationship between the size of the lysis zone and the amount of enzyme in question is not known. Moreover, the agar matrix used in the system is not physiological and therefore some cells do not survive this treatment. Also, this technique can only be used for cells that grow in soft agar and it is capable of detecting only those enzymes that digest the macromolecular substrates. ##STR1## has been introduced (Bryness et al., 116 Anal. Biochem. 408-413 (1981)) as an exceptionally useful fluorogenic group for synthetic substrates because: (a) it is approximately the same size as, .beta.-naphthylamine, ##STR2## a fluorogenic moiety commonly used in proteinase substrates; (b) after alkylation of the ring nitrogen, it has a similar distribution of charges as the p-nitroaniline leaving group, ##STR3## (c) acy1aminoquinolines are known to fluoresce only weakly in the bluish-white region of the spectrum, whereas the free amine emits intensely yellowish green light (the part of the visual spectrum in which the eye is most sensitive); (d) the appearance of 6-AQ can be measured fluorometrically at its excitation and emission maxima, while at these wavelengths the substrate is essentially nonfluorescent (Brynes et al., supra, 1981); (e) the wavelength of maximal excitation of 6-AQ is sufficiently low in energy that chromophores of proteins and nucleic acids are not excited; (f) the amino group of 6-AQ can undergo acylation by peptides in high yield because it is more basic than the resonance-deactivated amino groups of other frequently used chromophores; and (g) the ring nitrogen of the quinolines is readily quaternized by a variety of alkylating agents, generating highly water soluble substrates.

SUMMARY OF THE INVENTION

1. Objects of the Invention

It is an object of this invention to provide an immobilized fluorogenic substrate suitable for identifying and quantifying both production and secretion of cell specific enzymes, intra- and extra-cellularly, in human and mammalian body fluids as well as in animal cell extracts.

An object of this invention is to provide processes for preparing the immobilized substrates of this invention.

Another object of this invention is to provide processes for using the immobilized substrates of this invention to identify and quantify production and/or secretion of cell specific enzymes.

It is an object of this invention to utilize the changes in the chromophore of a fluorogenic substrate, when hydrolyzed, for proteinase detection.

Another object is to utilize a chromophore: (a) that does not interfere with the catalytic reaction; (b) that has little or no background fluorescence at the wavelength of interest prior to cleavage; (c) such that the released amine is highly fluorescent at wavelengths where the detector has maximum sensitivity; and (d) such that the energy required to excite the chromophore is low, thus avoiding undesired photochemical reactions in biological systems.

Another object of this invention is to provide a fluorogenic substrate which has functional groups that allow the chromophore to be covalently attached to an insoluble support or to a small polymerizable molecule that can be utilized for insoluble polymer formation.

An object of the present invention is to design and synthesize oligopeptidyl amides of 6-aminoquinolines as fluorogenic substrates that undergo selective hydrolysis by specific proteinases such as plasminogen activators, elastases collagenases and the like.

Another object of this invention is to test the specificity, sensitivity and efficiency of the fluorogenic substrates by measurement of the rates of proteolysis in solution with purified enzymes.

Still another object of this invention is to covalently attach the fluorogenic moiety of the substrates to solid supports such as polyacrylamide microspheres, hydroxyethylmethacrylate gels and the like.

An object of this invention is to use immobilized fluorogenic substrates for proteolysis by quantitative fluorescence microscopy.

A further object of this invention is to utilize the immobilized fluorogenic substrates as a solid support for cell attachment and/or growth.

An object of this invention is to provide new processes for investigating in vitro detection of proteinase release by cells in culture.

These and other objects and advantages of this invention will become apparent by practice of the invention, and attained by means of the methods, processes, instrumentalities, and combinations, particularly pointed out in the amended claims.

2. Definitions

Unless otherwise stated, all amino acids used have the L-configuration, and the abbreviations have the following meanings:

Ala=alanine

Arg=arginine

Phe=phenylalanine

Pro=proline

Val=valine

Further abbreviations used are:

Ac=Acetyl

AcOH=Acetic Acid

AllylAQ.sup.+ =1-allylaminoquinolinium ion

AMC=7-amino-4-methylcoumarin

6-AQ=6-aminoquinolines

Bz=Benzoyl

Bz-Val-Gly Arg-6AQ=6-(N-benzoyl-L-valyl-glycyl-L-arginylamino) quinoline

Cbz=carbobenzoxy

Cbz-Ala-Ala-6AQ=6-(N-carbobenzoxy-L-alanylamino) quinoline

Cbz-Ala-Ala-Pro-Val-6AQ=6-(N-carbobenzoxy-L-alanyl-L-alanyl-L-prolyl-L-valy lamino) quinoline

.gamma.GFx=Gamma Globulin Fraction

HEMA=2-hydroxyethyl methacrylate

HLE=Human Leukocyte Elastase

IMR-90=Human Embryonic Lung Fibroblasts

LLCPK-C4=Porcine Kidney Cells

MAQ.sup.+ =1-methylaminoquinolinium ion

.beta.NA=.beta.-Naphthylamine

pNA=p-nitroaniline

PA-Plasminogen Activator

Suc-Ala-Ala-Ala- 6AQ=6-[N-(succinylamido)-L-alanyl-L-alanyl-L-alanylamino]quinoline

3. Brief Description of The Invention

The aforementioned problems associated with the currently available methods for the detection of proteinases are overcome by the applicants' invention. According to this invention, there are provided novel immobilize fluorogenic substrates whose spectroscopic fluorescence absorption and emission maxima shift to longer wavelength when the peptid moiety is enzymatically cleaved.

The immobilized substrates of this invention may be prepared by linking the initial fluorogenic substrate (peptide-fluorophore assembly) via a spacer directly and covalently (a) to an insoluble biologically inert polymer or (b) to a small inherently polymerizable molecule that can be used to generate the insoluble polymer by copolymerization with a monomer.

In one aspect, this invention relates to an immobilized fluorogenic substrate for identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell specific enzymes in human and mammalian body fluids as well as in animal cell extracts, which has the structure:

R.sub.1 -NH-R.sub.4 -R.sub.2 -R.sub.3

wherein

R.sub.1 represents an oligopeptide which has a amino acid sequence that is enzyme specific in terms of cleavage at the peptide linkage proximal to the fluorogenic moiety;

R.sub.2 represents a spacer group which is a methylenecarbonyloxy, a methylenecarboxamido or a methylenesulfonamido group attached to a polymethylene chain which itself has an .omega.-amino, .omega.-hydroxyl or .omega.-carboxylic acid or other function suitable for coupling with a polymer;

R.sub.3 represents a biologically inert polymer having a complementary group (i.e., a carboxylic acid or hydroxyl or amino group) which forms an ester or amide linkage with the .omega.-function of the spacer moiety; and

R.sub.4 represents a fluorogenic moiety bearing the amino group and having a second functional group to which is attached the spacer group. R.sub.4 preferably is an aminoquinolines and for purposes of illustrating this invention, the description which follows will be directed to a particular aminoquinolines, namely 6-aminoquinoline. Other chromophores can be utilized according to applicants' invention through suitable adaptations of the general principles described herein.

In another aspect, this invention relates to a process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra and extra cellularly, the production and secretion of cell-specific enzymes in human and mammalian body fluids as well as in animal cell extracts which comprises:

(a) coupling an enzyme-specific oligopeptide to the primary amino group of a fluorescent aminoquinolines via an amide linkage;

(b) quaternized the ring nitrogen of the quinoline moiety with an alkylating spacer group selected from halo-acetylamino, halo-acetoxy- or halomethysulfonylamino-polymethylene compounds having an .omega.-amino (protected), an .omega.-hydroxyl, or an .omega.-carboxylic acid group or other suitable group;

(c) coupling the .omega.-functional group of a spacer moiety with the complementary group of the polymer material (solid support) to form an ester or an amide linkage, which intrinsically immobilizes the peptidyl quinoline assembly.

In still another aspect, the invention relates to a process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra- and extra-cellularly, the production and secretion of cell-specific enzymes in human and mammalian body fluids as well as in animal cell extracts which comprises:

(a) coupling an enzyme-specific oligopeptide to the primary amino group of a fluorescent aminoquinolines via an amide linkage to form an enzyme cleavable substrate;

(b) coupling the .omega.-carboxylic acid group of a spacer arm to a functional group of a polymer material, the functional group being selected from an amino, hydroxy, thiol or primary amido group; and

(c) coupling the product of step (b) with the enzyme-cleavable substrate by quaternized the ring nitrogen of the quinoline moiety with the alkylating terminus of the spacer arm, which intrinsically immobilizes the peptidyl quinoline assembly.

This invention also relates to a process for preparing an immobilized fluorogenic substrate capable of identifying and quantifying, intra- and extra cellularly, the production and secretion of cell specific enzymes in human and mammalian body fluids as well as in animal cell extracts which comprises:

(a) coupling an enzyme specific oligopeptide to the primary amino group of a fluorescent aminoquinolines via an amide linkage;

(b) quaternized the ring nitrogen of the quinoline moiety with an alkylating spacer group selected from haloacetylamino, haloacetoxy- or halomethylsulfonylamino-polymethylene compounds having an .omega.-amino (protected), an .omega.-hydroxyl, an .omega.-carboxylic acid group or other suitable group;

(c) reacting the product of step (b) with an allyl amine using a mixed anhydride coupling technique to produce an allylic monomer; and

(d) copolymerizing the allylic monomer with a second (very easily) polymerizable monomer in the presence of a radical-generating catalyst, to immobilize the enzyme cleavable substrate.

In yet another aspect, this invention relates to a process for identifying and quantifying, intra and/or extra-cellularly, the production and secretion of cell specific enzymes which comprises (a) providing an immobilized fluorogenic substrate having the structure:

R.sub.1 NH-R.sub.4 -R.sub.2 -R.sub.3

wherein

R.sub.1 represents an oligopeptide which has an amino acid sequence that is enzyme-specific in terms of cleavage at the peptide linkage proximal to the fluorogenic moiety;

R.sub.2 represents a spacer group which is a methylenecarbonyloxy, a methylenecarboxamido or a methylenesulfonamido group attached to a polymethylene chain which itself has an .omega.-amino, .omega.-hydroxyl .omega.-carboxylic acid or other function suitable for coupling with a polymer;

R.sub.3 represents a biologically inert polymer having a complementary group (i.e., a carboxylic acid or hydroxyl or amino group) which forms an ester or amide linkage with the .omega.-function of the spacer moiety; and

R.sub.4 represents a fluorogenic moiety bearing the amino group and having a second functional group to which is attached the spacer group;

(b) contacting, intra- or extra-cellularly, at least one human or mammalian test cell with the immobilized fluorogenic substrate, in an aqueous medium, the test cell being capable of producing and/or secreting a cell-specific enzyme in the aqueous medium, the fluorogenic substrate:

(i) fluorescing at a first wavelength which is an intrinsic characteristic of the fluorogenic substrate, and

(ii) upon cleavage of the peptide bond proximal to the fluorogenic moiety by a cell-specific enzyme, fluorescing at a second wavelength which is an intrinsic characteristic of the cleaved substrate;

(c) measuring the intensity of fluorescence produced over a period of time by said test cell, as a function of the production and/or secretion of the cell-specific enzyme by the test cell; and

(d) comparing said measurement with a measurement of fluorescence produced by a normal cell or a second test cell when placed in contact with the immobilized test substrate, the difference in said measurements being indicative of the production and/or secretion of enzymes specific to a cell type, by the test cell.

The immobilized substrates of this invention may be prepared according to one of the following three reaction sequences: ##STR4## x is an integer between 1 and 6; y is an integer between 1 and 15; n is an integer greater than 2 and sufficiently large so that the polymer is present as a gel or as a solid.

Suitable oligopeptides (aa.sub.x in the above reactions according to applicants' invention) include the following sequences where X refers to any of the standard N-terminal blocking agents or H, and Y refers to a fluorescent amine:

X-valyl-proplyl-arginyl-Y;

X-(D)-phenylalanyl-picolyl-arginyl-Y;

X-phenylalanyl-valyl-arginyl-Y; X-glycyl-proplyl-arginyl-Y;

X-valyl-leucyl-lysyl Y; X-(D)-valyl-leucyl-lysyl-Y;

X-glutamyl-lysyl-lysyl-Y; X-glycyl-prolyl-lysyl-Y;

X-valyl-glycyl arginyl-Y; X-glutamyl-glycyl-arginyl-Y;

X-prolyl-phenylalanyl-arginyl-Y;

X-(D)-prolyl phenylalanyl-arginyl-Y;

X-(D)-valyl-leucyl-arginyl-Y;

X-isoleucyl-glutamyl-glycyl-arginyl-Y;

X-alanyl-prolyl-alanyl-Y; X-alanyl-alanyl-prolyl-valyl-Y;

X-alanyl-alanyl-prolyl-methionyl-Y; and the like.

Suitable spacer arms or groups according to applicants' invention are those which have a methylenecarbonyloxy, a methylenecarboxamido or a methylenesulfonamido group attached to a polymethylene chain which itself has an .omega.-amino, .omega.-hydroxyl, .omega.-carboxylic acid or other function suitable for coupling with a polymer.

Preferred are those having the formula:

--CH.sub.2 X.sub.1 X.sub.2 (CH.sub.2).sub.y X.sub.3

wherein:

X.sub.1 is CO or SO.sub.2,

X.sub.2 is NH, a is zero or one, provided that when a is

zero, X.sub.1 is CO;

X.sub.3 is NH, NHCO or CONH or OCO or COO or Si(O--).sub.3 ; and

y is an integer between zero and 15. Particularly preferred are:

CH.sub.2 CONH(CH.sub.2).sub.5 CONH

CH.sub.2 CONHCH.sub.2 CH.sub.2 NHCO

CH.sub.2 CONH

CH.sub.2 CONHCH.sub.2 CH.sub.2 CH.sub.2 Si(O--).sub.3

CH.sub.2 CONH(CH.sub.2).sub.5 CONHCH.sub.2 CH=CH.sub.2

Suitable polymers according to applicants' invention include: polyacrylamide, polystyrene, (e.g., poly(4-aminostyrene) silica gel and glass (beads or plates).

Suitable monomers for polymerization with the N-allyl amides are copolymers of hydroxyethyl methacrylate, butadiene, styrene, vinyl acetate acrylic esters, acrylic amides and mixtures thereof and the like.

The fluorogenic group as illustrated in the above reactions is an aminoquinoline, but other fluorogenic groups may be employed which provides the characteristics of the aminoquinoline groups shown herein.

The fluorescent moiety in all cases has the following properties on attachment to the oligopeptide:

(1) abolition or substantial reduction of the fluorescence of the parent chromophore occurs or a shift in position of the fluorescence band occurs such that there is no interference with the fluorescent spectrum of the parent chromophore.

(2) freely diffusable into an aqueous solution, but once linked, it stays on surface of the solid support and is immobilized;

(3) when quaternized, the fluorogenic moiety is water soluble and, therefore, the kinetics of the material before and after immobilization can be correlated. Such kinetics can not be done in organic solvents.

Suitable fluorogenic moieties according to applicants' invention are believed to include aminoquinolines and their alkyl and alkoxyl derivatives; alkyl, alkoxyl, and carboxyl derivatives of aminonaphthalenes; alkyl, alkoxyl, and carboxyl derivatives of aminocoumarins; alkyl, alkoxy, amino and carboxyl derivatives of acridines; alkyl, alkoxyl, amino, nitro, and carboxyl derivatives of benzofurazans.

Preferred are the aminoquinolines such as 3-amino-quinoline (3-AQ), 2-dimethyl-aminomethyl-6-aminonaphthalene (DAN) and 4-dimethylaminomethyl-6-aminocoumarin (DAC) and particularly preferred is 6 aminoquinoline.

The preparation of 6-aminoquinoline (6-AQ) is described by Brynes et al., 116 Anal. Biocyem. at 409 (1981). Therein, it is disclosed that 5.0 g (28.7 mmol) of 6-nitroquinoline was added to 50 ml of a 50% aqueous solution of acetic acid. The solution was heated to 75.degree. C., and then 4.0 g (71.7 mmol) of iron filings was slowly added during 20 min. After stirring for 90 min at this temperature, the suspension was cooled, poured over 50 g of crushed ice, and the pH adjusted to 8.5 with Na.sub.2 CO.sub.3. The brown aqueous suspension was extracted with chloroform and the organic phases were combined, dried over magnesium sulfate, and evaporated in vacuo to afford 3.7 g of tan solids. The crude product was sublimed and recrystallized from water to yield 3.3 g (80% yield) of 6-Ag, mp 112.degree.-113.degree. C.

Applicants' invention allows both the detection and precise localization of proteolytic enzyme activity in biological samples. Short peptide chains bearing an amino acid sequence that mimics the region at the preferred site of the enzyme's cleavage of the natural substrate are prepared and then attached via an amide bond to a fluorescent amine, for example, 6-aminoquinoline (6-AQ). The resulting synthetic substrate, which is nonfluorescent in the regions where 6-AQ absorbs and emits, is then attached covalently via the fluorogenic amine's other chemically reactive functional group to suitably derivatized (alkylatable or acylatable) plastic, glass or other polyionic surfaces such as petri dishes, microscope slides/coverslips, or plastic or polyionic microparticulates. A sample (tissue biopsy, cultured cells or bacteria) is laid on the surface and, shortly thereafter, an intensely fluorescent zone appears at the precise location of proteolytic activity. A key aspect of the invention is that because the reagent is covalently attached to the support and cannot diffuse in solution, localization of enzymatic activity is unequivocal and defined. A wide variety of fluorescent amines can be employed because the immobilized fluorogenic substrates can be made highly selective for specific enzymes merely by varying the sequence of amino acids attached to the fluorescent amine.

According to the present inve