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| United States Patent | 5603351 |
| Link to this page | http://www.wikipatents.com/5603351.html |
| Inventor(s) | Cherukuri; Satyam C. (Cranbury, NJ);
Demers; Robert R. (Cranbury, NJ);
Fan; Zhong H. (Middlesex, NJ);
Levine; Aaron W. (Lawrenceville, NJ);
McBride; Sterling E. (Lawrence Township, Mercer County, NJ);
Zanzucchi; Peter J. (West Windsor Township, Mercer, County, NJ) |
| Abstract | A system and method for accomplishing a plurality of combinatorial
processes in parallel comprising a microelectronic and fluidic array
(device array) having micron-sized reservoirs, connecting microchannels
and reaction cells etched into a substrate. The device array is supported
by a station which serves to interface and perform electro-optic
measurements of material in the reaction cells of the device array. The
device array incorporates a modular configuration with three distinct
layers or plates. The device array comprises a top feedthru plate, a
center distribution plate and a bottom cell plate. The three plates are
stacked vertically and coupled together to form a liquid-tight seal.
Reservoirs, microchannels and reactions cells are controllably etched onto
the plates using traditional semiconductor fabrication techniques. The top
feedthru plate serves as a cover for the device array and contains
apertures selectively positioned above the reservoirs located in the
center distribution plate. The center distribution plate comprises a
plurality of micron sized reservoirs, microchannels, reservoir feeds, cell
feeds and overflow feeds for the distribution of reagent fluids to the
reaction cells located in the bottom cell plate. The detachable bottom
cell plate serves as a microlaboratory tray of reaction cells. Once the
proper reagents or other materials are introduced into the reaction cells,
the bottom cell plate is decoupled from the device array and removed for
incubation or analysis. |
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Title Information  |
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Drawing from US Patent 5603351 |
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Method and system for inhibiting cross-contamination in fluids of
combinatorial chemistry device |
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| Publication Date |
February 18, 1997 |
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Title Information  |
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Claims  |
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What is claimed is:
1. An array for accomplishing various chemical processes through the use of
fluids, the array comprising:
a plurality of reservoirs, microchannels and reaction cells disposed on a
dielectric substrate, where fluids are selectively channeled from the
plurality of reservoirs to the plurality of reaction cells through the
plurality of microchannels;
a plurality of micropumps located in the array for pumping fluid through
the microchannels; and
a plurality of dams located in the array, each for inhibiting the flow of
fluid in one of the microchannels.
2. The array of claim 1, wherein, for each dam, the activation of a
micropump in the array is effective to push the fluid past the dam.
3. The array of claim 1, wherein at least one of the dams is located so as
to inhibit the flow of fluid from one microchannel to a channel connected
to a reaction cell.
4. The array of claim 1, wherein microchannels are formed in the top
surface of a first plate of dielectric substrate that is sealed to the
bottom surface of a second plate of dielectric substrate, and wherein, for
each dam, a conduit over the dam is formed in the bottom surface of the
second plate.
5. The array of claim 1, wherein microchannels and reservoirs are formed in
the top surface of a first plate of dielectric substrate that is sealed to
the bottom surface of a second plate of dielectric substrate.
6. The array of claim 5, wherein the second plate has a plurality of
apertures, each located above a reservoir, for transferring fluids into
the reservoirs.
7. The array of claim 5, further comprising a third plate of dielectric
substrate located underneath the first plate and defining the plurality of
reaction cells.
8. The array of claim 5, wherein the second plate further comprises a
plurality of electrical conduits extending through the second plate and
wherein the array further comprises a plurality of micropumps connected to
the plurality of electrical conduits.
9. The array of claim 8, wherein the micropumps each comprise two
electrodes projecting from the electrical conduits.
10. The array of claim 9, wherein the electrodes have shaped termini.
11. The array of claim 5 wherein the first plate further comprises a buffer
channel connected to a plurality microchannels via intervening dams, the
buffer channel minimizing cross contamination of fluids.
12. The array of claim 1, wherein the dielectric substrate is glass.
13. A system for accomplishing various chemical processes through the use
of fluids, the system comprising:
the array of claim 1, and
a control apparatus, electrically connected to the array, for controlling a
flow of the fluids within the array.
14. An array for accomplishing various chemical processes through the use
of fluids, the array comprising:
a plurality of reservoirs, microchannels and reaction cells disposed on a
dielectric substrate, where fluids are selectively channeled from the
plurality of reservoirs to the plurality of reaction cells through the
plurality of microchannels, wherein the reservoirs and microchannels are
formed in a first plate of dielectric substrate, the top surface of which
is sealed to the bottom surface of a second plate of dielectric substrate;
a plurality of electrical conduits extending through the second plate; and
a plurality of micropumps connected to the electrical conduits.
15. The array of claim 14, further comprising a plurality of dams located
in the array, each for inhibiting the flow of fluid in one of the
microchannels.
16. The array of claim 15, wherein, for each dam, the activation of a
micropump in the array is effective to push the fluid past the dam.
17. The array of claim 15, wherein at least one of the dams is located so
as to inhibit the flow of fluid from one microchannel to a channel
connected to a reaction cell.
18. The array of claim 15, wherein, for each dam, a conduit over the dam is
formed in the bottom surface of the second plate.
19. An array for accomplishing various chemical processes through the use
of fluids, the array comprising:
a plurality of microchannels and reaction cells disposed on a dielectric
substrate, wherein the microchannels are formed in a first plate of
dielectric substrate, the top surface of which is sealed to the bottom
surface of a second plate of dielectric substrate,
wherein the microchannels comprise a plurality of continuous flow channels
each designed to maintain a continuous flow of a fluid which can be
delivered to a plurality of reaction cells and a bypass channel connected
to the plurality of continuous flow channels for accepting and draining
the fluid from the continuous flow microchannels that is not delivered to
a reaction cell.
20. The array of claim 19, further comprising a buffer plenum for
minimizing cross contamination of fluids.
21. The array of claim 20, wherein the first plate further comprises, for
each of a plurality of continuous flow channels, a first channel for
connecting that continuous flow microchannel channel to the buffer plenum.
22. The array of claim 19, wherein the second plate further comprises a
plurality of electrical conduits extending through the second plate and
wherein the array further comprises a plurality of microgates, which are
connected to the plurality of electrical conduits, for regulating the flow
of the fluids.
23. A system for accomplishing various chemical processes through the use
of fluids, the system comprising:
the array of claim 22,
a control apparatus, electrically connected to the array, for controlling a
flow of the fluids within the array, and
an interface module coupled to the array for electrically connecting the
array to the control apparatus.
24. The array of claim 20, wherein the continuous flow channels each
further comprise an expansion section for enhancing passage of the fluids.
25. An array for accomplishing various chemical processes through the use
of fluids, the array comprising:
a plurality of reservoirs, microchannels and reaction cells disposed on a
dielectric substrate, where fluids are selectively channeled from the
plurality of reservoirs to the plurality of reaction cells through the
plurality of microchannels, wherein the reservoirs and microchannels are
formed in a first plate of dielectric substrate, the top surface of which
is sealed to the bottom surface of a second plate of dielectric substrate;
a plurality of electrical conduits extending through the second plate; and
a plurality of micropumps each comprising two electrodes, which electrodes
project from the electrical conduits.
26. The array of claim 25, further comprising a plurality of dams, each for
inhibiting the flow of fluid in one of the microchannels.
27. The array of claim 26, wherein, for each dam, the activation of a
micropump in the array is effective to push the fluid past the dam.
28. The array of claim 26, wherein at least one of the dams is located so
as to inhibit the flow of fluid from one microchannel to a channel
connected to a reaction cell.
29. The array of claim 26, wherein microchannels are formed in the top
surface of a first plate of dielectric substrate that is sealed to the
bottom surface of a second plate of dielectric substrate, and wherein, for
each dam, a conduit over the dam is formed in the bottom surface of the
second plate.
30. The array of claim 25, wherein microchannels and reservoirs are formed
in the top surface of the first plate of dielectric substrate that is
sealed to the bottom surface of the second plate of dielectric substrate.
31. The array of claim 30, wherein the second plate has a plurality of
apertures, each located above a reservoir, for transferring fluids into
the reservoirs.
32. The array of claim 25, wherein the electrodes have shaped termini.
33. The array of claim 25, wherein the dielectric substrate is glass.
34. The array of claim 25, wherein the dielectric substrate is high melting
borosilicate glass or fused silica. |
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Claims  |
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Description  |
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The present invention relates to a method and system for accomplishing
various combinatorial processes, including syntheses, screening and
chemical diagnostic assays. More particularly, this invention relates to a
system and method that incorporates a layered array for inhibiting
cross-contamination of reagent fluids used in such combinatorial
processes.
BACKGROUND OF THE INVENTION
Traditional methods in the field of combinatorial chemistry for making a
homologous series of compounds or testing of new potential drug compounds
were often slow and tedious. The underlying reason is that each member of
the series or each potential drug compound must be created individually
and tested individually. During this testing stage, it is common that the
exact composition and/or behavior of a compound or new potential drug is
unknown. In order to discover the proper composition of a compound or to
observe the behavior of a new potential drug, a multitude of experiments
must be conducted. For example, a plurality of potential drug compounds is
tested by using an agent to test a plurality of materials that may differ
only by a single amino acid or nucleotide base, or have a different
sequence of amino acids or nucleotides. Furthermore, these experiments may
investigate the effectiveness of the compound in different concentrations
or its reaction to other reagents. This process for discovering and
developing compounds or a new potential drug by combinatorial chemistry is
labor intensive and costly.
Traditionally, these experiments are conducted by manually injecting
reagent fluids or other agents into a multitude of vials. Each vial is
filled manually by a laboratory technician. The solution within each vial
may differ only slightly from an adjoining vial so that permutations of
the solution are investigated simultaneously. Generally, a receptor having
a fluorescent tag is introduced to each vial and the solution is incubated
with the receptor. When a proper reaction is obtained where the receptor
reacts with the solution, the result can be detected optically by
observing the site of the fluorescent tag. The fluorescent data is
transmitted to a computer which identifies the compound reacted and the
degree of the reaction. Thus, combinatorial chemistry allows screening of
thousands of compounds for the desired activity.
Recently, the process has been improved to some degree with the
introduction of robotics into the field. Robotic arms are employed to
automate the process of depositing materials into the multitude of vials.
This improvement relieves the laboratory technician from a tedious task
and increases the efficiency and accuracy of the process. A robotic arm is
able to more accurately deposit a precise amount of material repeatedly
into different vials.
However, the process continues to face problems in the area of cost and
space. With thousands of compounds being tested and in some cases
incubated over a period of time, the process requires a large quantity of
space to house the multitude of trays of vials. In addition, these vials
are generally large and cumbersome to handle.
Furthermore, the process generally consumes a large quantity of reagents
for testing thousands of compounds. These reagents and other materials
used in the process are often very expensive or difficult to obtain. Thus,
to reduce the cost and increase the efficiency of the process, it is
necessary to replace the vials with other smaller reaction cells. By
reducing the size of the reaction cell, the process consumes a smaller
quantity of reagents. In addition, a proper control and delivery system is
necessary for regulating and distributing minute amount of reagents to the
reaction cells.
Recently, there are developments where traditional semiconductor techniques
are combined with the synthesis of various compounds having potential
biological activity. For example, a semiconductor or dielectric substrate
is coated with a biologic precursor having such amino groups with a
light-sensitive protective chemical. A series of masks are placed over the
substrate with each mask having an opening. By introducing photosensitive
amino acid through the openings, the reaction creates a particular
compound that can be detected optically.
However, the synthesis of each reaction is not always complete and the
process may need additional layers of mask for introducing new agents.
Creating new masks is a complex and expensive process. In addition, the
process of aligning a plurality of masks and forming openings in the mask
in sequence requires careful alignment and is time consuming.
Nevertheless, the advantages in terms of size and efficiency of traditional
semiconductor techniques are extremely attractive. Specifically, through
the use of microchannels, the process of combinatorial chemistry is
effectively conducted on a microcell scale. This approach addresses the
problems of size and cost attributed to the traditional combinatorial
process.
Therefore, a need exists in the art for a system and method that
incorporates a microelectronic and fluidic array for accomplishing the
process of combinatorial chemistry.
SUMMARY OF THE INVENTION
The system of the present invention comprises a microelectronic and fluidic
array (device array) having micron sized reservoirs, connecting
microchannels and reaction cells etched into a substrate. The device array
is supported by a station which serves to interface and perform
electrooptic measurements of material in the reaction cells of the device
array. The station also controls the fluid flow of reagents to the
reaction cells.
The device array incorporates a modular configuration with three distinct
layers or plates. The device array comprises a top feedthru plate, a
center distribution plate and a bottom cell plate. The three plates are
stacked vertically and coupled together to form a liquid-tight seal. The
top feedthru plate is bonded or fused to the center distribution plate,
while the center distribution plate is detachably coupled to the bottom
cell plate. The plates can be made from glass, fused silica, quartz or a
silicon wafer. Reservoirs, microchannels and reaction cells are
controllably etched onto the plates using traditional semiconductor
fabrication techniques with a suitable chemical or laser etchant.
The top feedthru plate serves as a cover for the device array and contains
apertures selectively positioned above the reservoirs located in the
center distribution plate. These apertures provide the necessary openings
for a loading module to fill the reservoirs with a plurality of reagents
or other materials. The top feedthru plate further comprises a plurality
of micropump electrodes that extend completely through the top feedthru
plate. The micropump electrodes are coupled to a plurality of electrical
contacts on one end and are geometrically shaped to act as electrofluidic
pumps on the other end. These miniature pumps (micropumps) are activated
by selectively applying a voltage source to the electrical contacts
located on the top surface of the top feedthru plate.
The center distribution plate comprises a plurality of micron-sized
reservoirs, microchannels, reservoir feeds, cell feeds and overflow feeds,
which are selectively etched on both sides (top and bottom) of the center
distribution plate. These channels and reservoirs form a grid delivery
system where reservoirs are grouped into column reservoirs, row reservoirs
and matrix reservoirs. Column reservoirs are coupled to microchannels that
deliver reagents to a location vertical from the column reservoirs, while
row reservoirs are coupled to microchannels that deliver reagents to a
location horizontal from the row reservoirs. Finally, matrix reservoirs
are coupled to microchannels that deliver reagents to a location both
vertical and horizontal from the matrix reservoirs.
Thus, the center distribution plate is defined into a plurality of sectors
in a grid configuration. Each sector on the center distribution plate is
directly positioned above a reaction cell located on the bottom cell
plate. The reagents channeled to a sector from the different reservoirs
are prohibited from entering the cell feed by a plurality of dams. By
activating the miniature pumps, selected reagents are drawn over the dams
from the microchannels and deposited into the reaction cells located in
the bottom cell plate via the cell feeds.
The detachable bottom cell plate comprises a plurality of micron-sized
reaction cells and drain feeds. The bottom cell plate effectively serves
as a microlaboratory tray of reaction cells replacing the tray of vials
used in the traditional process of combinatorial chemistry. Once the
proper reagents or other materials are introduced into the reaction cells,
the bottom cell plate is decoupled from the device array and removed for
incubation or analysis. Generally, the bottom cell plate is analyzed under
a detector, such as a fluorescence detector, to screen for a desired
reaction.
Finally, the device array is supported by a laboratory station. The station
comprises a computer, a detector module, an interface module and a loading
module. The computer is programmed to give instructions to the device
array and to record test results obtained therefrom. The interface module
controlled by the computer is coupled to the top feedthru plate to
selectively activate miniature pumps within the device array. The detector
module serves to determine whether a desired reaction has occurred, while
the loading module supplies the necessary reagents and other materials to
conduct the experiments within the device array.
In one embodiment of the present invention, the center distribution plate
incorporates a continuous flow configuration as opposed to an interrupted
flow configuration as disclosed above. The continuous flow configuration
incorporates a steady flow of reagents within the microchannels. The flow
of the reagents in the microchannels is directed toward a drain away from
the reaction cells. Contemporaneously, the reagents are also coupled to a
plurality of constricted secondary buffer feeds which permit the reagents
to flow into a buffer plenum. The buffer plenum is coupled to the reaction
cells. A reagent fluid is selected by activating an electrically operated
transducer or microgate to stop or inhibit the flow of the reagent into
the drain, thereby forcing the reagent to flow into the secondary buffer
feed and into the reaction cell. The volume of the selected reagent within
the buffer plenum and the negative pressure tend to isolate other reagents
from entering the reaction cell.
BRIEF DESCRIPTION OF THE DRAWINGS
The teachings of the present invention can be readily understood by
considering the following detailed description in conjunction with the
accompanying drawings, in which:
FIG. 1 illustrates the system of the present invention adapted for
performing the processes of combinatorial chemistry;
FIG. 2 illustrates the microlaboratory device array of the present
invention;
FIG. 2A is a detailed section view of the microlaboratory device array
shown in FIG. 2;
FIG. 3 illustrates an exploded perspective view of a section of the
microlaboratory device array of the present invention;
FIG. 4 illustrates a sectional view of the microlaboratory device array of
the present invention taken along line 44 of FIG. 2;
FIG. 5 illustrates a sectional view of the microlaboratory device array of
the present invention taken along line 55 of FIG. 2;
FIG. 6 illustrates another embodiment of the present invention with a
continuous flow configuration;
FIG. 7 illustrates the sectional front view of the present invention with a
continuous flow configuration;
FIG. 8A illustrates the sectional side view of the present invention with a
continuous flow configuration where the microgate is in the "closed"
position; and
FIG. 8B illustrates the sectional side view of the present invention with a
continuous flow configuration where the microgate is in the "open"
position.
To facilitate understanding, identical reference numerals have been used,
where possible, to designate identical elements that are common to the
figures.
DETAILED DESCRIPTION
FIG. 1 depicts the system of the present invention adapted for performing
the processes of combinatorial chemistry. The system 50 comprises a
microelectronic and fluidic array 100, computer 110, peripheral devices
120 and laboratory station 180. The computer 110 is electrically coupled
to the laboratory station via line 112, where computer 110 controls the
distribution of reagents to the appropriate reaction cells (not shown in
FIG. 1) within the device array 100. Computer 110 is also programmed to
record and analyze the test results obtained from the device array 100.
Peripheral devices 120 such as a modem or printer are electrically coupled
to the computer 110 via line 122. These peripheral devices provide
communication and reporting capabilities to the system.
Laboratory station 180 comprises a device array support 130, detector
module 140, interface module 150, loading module 170 and waste fluids
collectors 160. The laboratory station 180 in combination with computer
110 operates upon device array 100 to perform parallel testing of
compounds.
Device array support 130 serves to receive and support device array 100
while reagents are deposited into the reservoirs of the device array.
Suitable device array supports or substrate holders are commercially
available.
Detector module 140 serves to detect the occurrence of a suitable reaction
within the reaction cells of the device array 100. Detector module 140
comprises one or more light sources 141, an optical fiber 142 and one or
more light detectors 143 such as a florescence detector. The optical fiber
142 is operative to transmit light from the light source 141 to the
detector 143 through the reaction cells. Specifically, the detector module
140 measures the transmittance or absorbency of material in the reaction
cells of the device array 100. The detector module 140 verifies the
presence or absence of materials in the reaction cells and quantifies
their amounts by transmitting the measurement data to the computer 110.
Suitable lasers, photodetectors and fiber optic adapters for supporting
the optical fiber are all commercially available. Furthermore, various
fiber optic adapters may include a lens for efficient transfer of light
from the light source into the optical fiber.
Interface module 150 serves as an interface for engaging the plurality of
electrical contacts (shown in FIG. 3 and described below) located on the
top surface of the device array 100. These electrical contacts provide the
necessary electrical connections for operating a plurality of micropumps
(not shown), which are employed to regulate the flow of reagents within
the device array 100. The interface module 150 which is electrically
connected between the computer 110 and device array 100, contains the
necessary circuitry and connectors for selectively providing voltages to
the electrical contacts of the micropumps in accordance with control
signals from the computer 110. For a particular process, the computer 110
activates the micropumps in accordance with a predefined sequence of steps
where different reagents are sequentially applied to the reaction cells.
Thus, once the reagent reservoirs are filled, the process of loading the
multitude of reaction cells with the proper reagent fluids is completely
automated. This automation permits the preparation of a large array of
reaction cells contemporaneously and reduces the cost and time required to
obtain meaningful results.
Loading module 170 comprises pumps 171 and capillary tubings 172 for
loading test materials and reagents onto the device array 100. The
capillary tubings 172 have an inner diameter of about 200 microns and
outer diameter of about 600-700 microns. For certain processes, the
capillary tubings 172 are pretreated to eliminate surface adsorption of
proteins and related bio-materials in a known manner such as methods
disclosed by Cobb, "Electrophoretic Separations of Proteins in Capillaries
with Hydrolytically Stable Surface Structures", Anal. Chem. 62, pp
2478-2483 (1990). The loading module 170 loads all materials onto the
device array 100. The capillary tubings 172 are positioned over the
apertures located on the top surface of the device array 100. Each
aperture corresponds to a reagent reservoir located on the center
distribution plate within the device array 100. Test materials are
deposited into the reagent reservoirs through the force of gravity.
Optionally, pump 171 can be employed to pump the test materials into the
reagent reservoirs. The external pump 171 can accurately deliver fluids in
reproducible and controlled amounts. The 205U multi-channel cassette pump
available from Watson-Marlow, Inc. is a suitable pump.
Waste fluids collectors 160 are housed in the laboratory station for the
collection of waste fluids. Depending on a particular process, a plurality
of reagent fluids is introduced into the reaction cells sequentially. This
process may cause a sequential flushing of the reaction cells with
different reagents where the expelled reagent fluids are collected into
the waste fluids collectors 160. Furthermore, under a continuous flow
configuration, reagent fluids flow continuously within the microchannels
of the device array 100. The flow of the reagents in the microchannels is
directed toward a drain away from the reaction cells. The excess reagents
from the drain are collected into the waste fluid collectors 160.
FIG. 2 and FIG. 3 depict respectively a top view and an exploded cutout
view of the device array 100 of the present invention, which is a
microelectronic and fluidic array having micron sized reservoirs,
connecting microchannels, feeds and reaction cells etched into a
substrate. The device array 100 comprises three distinct layers or plates.
Specifically, the device array 100 comprises a top feedthru plate 300, a
center distribution plate 310 and a bottom cell plate 320. The three
plates are stacked vertically and coupled together to form a liquid-tight
seal. In the preferred embodiment of the present invention, the top
feedthru plate 300 is bonded or fused to the center distribution plate 310
by thermal bonding or anodic bonding, while the center distribution plate
310 is detachably coupled to the bottom cell plate 320.
The plates can be made from glass, fused silica, quartz or a silicon wafer.
The plates are suitably about 2 inches by 2 inches with a thickness of 1
millimeter. The reservoirs, microchannels and reactions cells are finely
and controllably etched onto the plates using traditional semiconductor
techniques with a suitable chemical or laser etchant. High quality glasses
such as a high melting borosilicate glass or a fused silica are preferred
for their ultraviolet transmission properties for processes that use light
based technologies. In the preferred embodiment of the present invention,
the top feedthru plate 300 is made from glass. The use of glass which
serves as an insulator, permits the insertion of micropump electrodes in
close proximity through the top feedthru plate 300. The use of other
non-insulating material may cause a short between the densely packed
micropump electrodes.
The center distribution plate 310 having a complex network of distribution
microchannels, reservoirs and various feeds, is made preferably from
silicon. The techniques for etching silicon are well known in the art
which make silicon a preferred substrate for etching a complex
distribution network. However, once etched, the silicon substrate is also
pretreated to eliminate surface adsorption of proteins and related
bio-materials.
The top feedthru plate 300 serves as a cover for the device array 100 and
contains a plurality of apertures 302 selectively positioned above the
reagent reservoirs 200, 210 and 220 located in the center distribution
plate 310. The apertures are suitably about 500 microns by 3,000 microns
and they extend completely through the top feedthru plate 300. These
apertures 302 provide the necessary openings for the loading module 170 to
fill the reagent reservoirs 200, 210 and 220 with a plurality of reagents
or other materials.
The top feedthru plate 300 further comprises a plurality of micropump
electrodes 330 that extend completely through the top feedthru plate 300.
In the preferred embodiment of the present invention, the micropump
electrodes 330 consist of electrical conduit (feedthru) of electroplated
gold that terminates as a projection made of platinum. The length of the
micropump electrodes 330 is about 50 microns with a diameter of about
50-100 microns. The micropump electrodes 330 are coupled between a
plurality of electrical contacts 340 located on the top surface of the top
feedthru plate 300 and a plurality of projections 331. Electrodes 330
serve as electrodes for miniaturized electrofluidic pumps 360 (location is
shown only as two dots on the center distribution plate 310). The movement
of the fluids is accomplished by ionizing the fluids through application
of a difference of potential. The electrical contacts 340 are engaged with
the interface module 150, thereby permitting the computer 110 to control
the activation of the miniature pumps 360 for loading the reaction cells
350 with a predefined sequence of reagent fluids. These miniature pumps
360 are activated by selectively applying a voltage to the electrical
contacts 340 located on the top feedthru plate 300.
The miniaturized electrofluidic pumps 360 are based on electrokinetic pumps
disclosed by Dasgupta et al., see "Electroosmosis: A ReliableFluid
Propulsion System for Flow Injection Analysis", Anal. Chem. 66, pp
1792-1798 (1994). Other suitable pumps are based on microelectromechanical
systems (MEMS) such as reported by Shoji et al., "Fabrication of a
Micropump for Integrated Chemical Analyzing Systems", Electronics and
Communications in Japan, Part 2, 70, pp 52-59 (1989).
The center distribution plate 310 comprises a plurality of micron sized
reservoirs 200, 210 and 220, microchannels 212, 216, 218, 222, 224, 226,
230 and 240, reservoir feeds 214, cell feeds 370 and overflow feeds 380,
which are selectively etched on both sides (top and bottom) of the center
distribution plate 310. The reagent reservoirs are located on the sides of
the device array 100. The reservoirs are classified into matrix reservoirs
200, row reservoirs 210 and column reservoirs 220. Column reservoirs 220
are coupled to microchannels that deliver reagents to a location vertical
from the column reservoirs, while row reservoirs 210 are coupled to
microchannels that deliver reagents to a location horizontal from the row
reservoirs. Finally, matrix reservoirs 200 are coupled to microchannels
that deliver reagents to a location both vertical and horizontal from the
matrix reservoirs. Although three (3) sets of reagent reservoirs 200, 210
and 220 are illustrated, those skilled in the art will realize that
additional sets of reagent reservoirs can be incorporated into the device
array.
The matrix reservoirs 200 are capable of providing reagent fluids to all
reaction cells 350. Referring to FIG. 2 and FIG. 3, each matrix reservoir
200 is connected to a horizontal microchannel 212 which extends
horizontally across the device array 100 (from a top perspective view). A
plurality of reservoir feeds 214 is placed along the length of
microchannel 212. Each reservoir feed 214 serves as a feedthru for
connecting a horizontal microchannel 212 with a vertical microchannel 216
which extends vertically across the device array 100 (from a top
perspective view). The vertical microchannel 216 is in turn coupled to a
distribution microchannel 222 via distribution feed 225. Thus, the matrix
reservoirs 200 are capable of providing reagents to all "sectors" on the
center distribution plate 310. Each sector on the center distribution
plate 310 is an area positioned directly above a reaction cell as
illustrated by FIG. 3.
To illustrate, as a reagent fluid is deposited into matrix reservoir 200,
the reagent fluid fills the reservoir 200 and overflows into horizontal
microchannel 212. The reagent fluid is channeled downward into the
vertical microchannel 216 via reservoir feed 214, which functions like a
feedthru. Finally, as the reagent fluid completely fills the length of
vertical microchannel 216, the reagent fluid swells upward into
distribution microchannel 222 via distribution feed 225. The reagent fluid
will only rise up to the top surface of the center distribution plate 310.
The underlying reason is that the reagent fluid level is controlled by the
overflow feeds 380 and by the physical contact of the top feedthru plate
300. As the reagent fluid completely fills all the distribution
microchannels 222, the level of the fluid is stabilized by draining excess
fluids into overflow feeds 380. It should be noted that for simplicity,
FIG. 3 depicts only one set of microchannel 216 and distribution
microchannel 222. As illustrated in FIG. 2, there are actually four (4)
sets (or more) of these microchannels.
The flow of reagent fluids from the row reservoirs 210 operates in a
similar fashion. As a reagent fluid is deposited into row reservoir 210,
the reagent fluid fills the reservoir and overflows into horizontal
microchannel 240. The reagent fluid simply flows along the horizontal
microchannel 240 and into microchannels 224. Finally, as the reagent fluid
completely fills the length of microchannel 240, the reagent fluid also
rises up to the top surface of the center distribution plate 310. Again,
the overflow feeds 380 and the physical contact of the top feedthru plate
300 combine to control the reagent fluid level. As the reagent fluid
completely fills all the distribution microchannels 224, the level of the
fluid is stabilized by draining excess fluids into overflow feeds 380. One
significant difference between the matrix reservoirs 200 and the row
reservoirs 210 is that the row reservoirs are only capable of delivering
its reagents to the reaction cells 350 that are situated horizontally from
the row reservoirs. However, the matrix reservoirs 200 are capable of
delivering its reagents to all reaction cells 350 within the device array
100.
The flow of reagent fluids from the column reservoirs 220 also operates in
the same manner. As a reagent fluid is deposited into column reservoir
220, the reagent fluid fills the reservoir and overflows downwardly into
vertical microchannel 230 via column feed 231, which functions like a
drain. Finally, as the reagent fluid completely fills the length of the
vertical microchannel 230, the reagent fluid swells upward into
distribution microchannel 226 via distribution feed 227. Again, the same
overflow scheme controls the reagent fluid level from the column reservoir
220. Similar to the row reservoirs, the column reservoirs are only capable
of delivering its reagents to the reaction cells 350 that are situated
vertically from the column reservoirs. This configuration of the various
reservoirs permits a large array of parallel tests to be conducted
simultaneously.
To illus | | |